2025

  1. Exploiting Trusted Execution Environments And Distributed Computation for Genomic Association TestsBrito, C. V., Ferreira, P. G., & Paulo, J. T.IEEE Journal of Biomedical and Health Informatics. 2025.

2024

  1. Can Current SDS Controllers Scale To Modern HPC Infrastructures?Miranda, M., Tanimura, Y., Haga, J., Ruhela, A., Harrell, S. L., Cazes, J., Macedo, R., Pereira, J., & Paulo, J.In Workshop of Intel Extreme Performance Users Group (IXPUG), colocated with SC. IEEE, 2024.

2023

  1. Privacy-Preserving Machine Learning on Apache SparkBrito, C. V., Ferreira, P. G., Portela, B. L., Oliveira, R. C., & Paulo, J. T.IEEE Access. 2023.

  2. Taming Metadata-Intensive HPC Jobs Through Dynamic, Application-Agnostic QoS ControlMacedo, R., Miranda, M., Tanimura, Y., Haga, J., Ruhela, A., Harrell, S. L., Evans, R. T., Pereira, J., & Paulo, J.In IEEE/ACM 23rd International Symposium on Cluster, Cloud and Internet Computing (CCGrid). IEEE, 2023.

  3. SOTERIA: Preserving Privacy in Distributed Machine LearningBrito, C., Ferreira, P., Portela, B., Oliveira, R., & Paulo, J.In Proceedings of the 38th ACM/SIGAPP Symposium on Applied Computing (SAC). ACM, 2023.

2022

  1. Protecting Metadata Servers From Harm Through Application-level I/O ControlMacedo, R., Miranda, M., Tanimura, Y., Haga, J., Ruhela, A., Harrell, S. L., Evans, R. T., & Paulo, J.In Workshop on Re-envisioning Extreme-Scale I/O for Emerging Hybrid HPC Workloads (REX-IO), colocated with CLUSTER. IEEE, 2022.

  2. PAIO: General, Portable I/O Optimizations With Minor Application ModificationsMacedo, R., Tanimura, Y., Haga, J., Chidambaram, V., Pereira, J., & Paulo, J.In 20th USENIX Conference on File and Storage Technologies (FAST). USENIX, 2022.

2021

  1. Pods-as-Volumes: Effortlessly Integrating Storage Systems and Middleware into KubernetesFaria, A., Macedo, R., & Paulo, J.In 7th International Workshop on Container Technologies and Container Clouds (WoC), colocated with Middleware. 2021.

  2. PAIO: A Software-Defined Storage Data Plane FrameworkMacedo, R., Tanimura, Y., Haga, J., Chidambaram, V., Pereira, J., & Paulo, J.ArXiv - Computing Research Repository (CoRR). 2021.

  3. BDUS: Implementing Block Devices In User SpaceFaria, A., Macedo, R., Pereira, J., & Paulo, J.In 14th ACM International Conference on Systems and Storage (SYSTOR). ACM, 2021.

  4. S2Dedup: SGX-enabled Secure DeduplicationMiranda, M., Esteves, T., Portela, B., & Paulo, J.In 14th ACM International Conference on Systems and Storage (SYSTOR). ACM, 2021.

2020

  1. Genodedup: Similarity-Based Deduplication And Delta-encoding For Genome Sequencing DataCogo, V., Paulo, J., & Bessani, A.IEEE Transactions on Computers. 2020.

  2. A Survey And Classification Of Software-Defined Storage SystemsMacedo, R., Paulo, J., Pereira, J., & Bessani, A.ACM Computing Surveys (CSUR). 2020.

2019

  1. A Case For Dynamically Programmable Storage Background TasksMacedo, R., Faria, A., Paulo, J., & Pereira, J.In Workshop on Distributed and Reliable Storage Systems (DRSS), colocated with SRDS. IEEE, 2019.

  2. TrustFS: An SGX-Enabled Stackable File System FrameworkEsteves, T., Macedo, R., Faria, A., Portela, B., Paulo, J., Pereira, J., & Harnik, D.In Workshop on Distributed and Reliable Storage Systems (DRSS), colocated with SRDS. IEEE, 2019.

2017

  1. DDFLASKS: Deduplicated Very Large Scale Data StoreMaia, F., Paulo, J., Coelho, F., Neves, F., Pereira, J., & Oliveira, R.In Distributed Applications and Interoperable Systems (DAIS). Springer, 2017.

  2. SafeFS: A Modular Architecture For Secure User-space File Systems: One Fuse To Rule Them AllPontes, R., Burihabwa, D., Maia, F., Paulo, J., Schiavoni, V., Felber, P., Mercier, H., & Oliveira, R.In 10th ACM International Systems and Storage Conference (best student paper award). ACM, 2017.

2016

  1. Efficient Deduplication In A Distributed Primary Storage InfrastructurePaulo, J., & Pereira, J.ACM Transactions on Storage (TOS). 2016.

  2. On The Cost Of Safe Storage For Public Clouds: An Experimental EvaluationBurihabwa, D., Pontes, R., Felber, P., Maia, F., Mercier, H., Oliveira, R., Paulo, J., & Schiavoni, V.In 35th Symposium on Reliable Distributed Systems (SRDS). IEEE, 2016.

2014

  1. A Survey And Classification Of Storage Deduplication SystemsPaulo, J., & Pereira, J.ACM Computing Surveys (CSUR). 2014.

  2. Distributed Exact Deduplication For Primary Storage InfrastructuresPaulo, J., & Pereira, J.In Distributed Applications and Interoperable Systems (DAIS). Springer, 2014.